FlexTyper

Introduction

FlexTyper is a tool which enables the creation of an FM-index of raw, next generation sequencing data to enable rapid and flexible sequence queries.

• Installation Instructions
• How to search with FlexTyper
  • Example 1: Virus Detection
  • Example 2: SNV Detection
• Example of FlexTyper Index

For detailed code documentation, see:

• Parameters
• Namespaces
• Classes

Browse the source code by clicking on the files tab above

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Copyright

Copyright (c) 2020, Wasserman lab